We construct a mathematical model of cancer dynamics with chemotherapeutic treatment, in the presence of bacteria that are capable of metabolizing the chemotherapeutic drug, hence sabotaging the treatment. We investigate the possibility of complementing the cancer treatment with antibiotic drugs, thus eradicating the bacteria or at least mitigating their negative impact on the prospects of therapy. Our model is a nonlinear system of four differential equations, for which we perform a complete analysis, explicitly characterizing the four possible outcomes, depending on whether the cancer cells or the bacteria extinct or persist. Global stability results are proven by the iterative application of a comparison principle, and a bifurcation diagram is created to show the transitions between scenarios with respect to the controllable parameters. We apply our model to an experiment on mice with colon cancer and the drug Gemcitabine.