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February 1st, 2025
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Bernhard-Nocht Institute for Tropical Medicine
bioinformatics
biorxiv

Potentials and limitations in the application of Convolutional Neural Networks for mosquito species identification using wing images

Nolte, K.Open in Google Scholar•Baumbach, J.Open in Google Scholar•Lins, C.Open in Google Scholar•Lohmann, J. J. G.Open in Google Scholar•Kollmannsberger, P.Open in Google Scholar•Sauer, F. G.Open in Google Scholar•Luehken, R.Open in Google Scholar

1. This study addresses the pressing global health burden of mosquito-borne diseases by investigating the application of Convolutional Neural Networks (CNNs) for mosquito species identification using wing images. Conventional identification methods are hampered by the need for significant expertise and resources, while CNNs offer a promising alternative. Our research aimed to develop a reliable and applicable classification system that can be used under real-world conditions, with a focus on improving model adaptability to unencountered devices, mitigating dataset biases, and ensuring usability across different users without standardized protocols. 2. We utilized a large, diverse dataset of mosquito wing images of 21 taxa and three image-capturing devices and an optimized preprocessing pipeline to standardize images and remove undesirable image features. 3. The developed CNN models demonstrated high performance, with an average balanced accuracy of 98.3% and a macro F1-score of 97.6%, effectively distinguishing between the 21 mosquito taxa, including morphologically similar pairs. The preprocessing pipeline improved the model\'s robustness, reducing performance drops on unfamiliar devices effectively. However, the study also highlights the persistence of inherent dataset biases, which the preprocessing steps could only partially mitigate. The classification system\'s practical usability was demonstrated through a feasibility study, showing high inter-rater reliability. 4. The results underscore the potential of the proposed workflow to enhance vector surveillance, especially in resource-constrained settings, and suggest its applicability to other winged insect species. The classification system developed in this study is available for public use, providing a valuable tool for vector surveillance and research, supporting efforts to mitigate the spread of mosquito-borne diseases.

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